Mario Valle Web

publications.bib

@ARTICLE{Cocito2003,
  AUTHOR = {Silvia Cocito and Sergio Sgorbini and Andrea Peirano and Mario Valle},
  JOURNAL = {Journal of Experimental Marine Biology and Ecology},
  TITLE = {{3-D} reconstruction of biological objects using underwater video technique and image processing},
  YEAR = {2003},
  MONTH = DEC,
  NUMBER = {1},
  PAGES = {57--70},
  VOLUME = {297},
  DOI = {10.1016/S0022-0981(03)00369-1},
  FILE = {:D\:/Books/Publications/3D-publication.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://mariovalle.name/publications/3D-publication.pdf}
}
@INCOLLECTION{Favre2004,
  AUTHOR = {Jean Favre and Mario Valle},
  BOOKTITLE = {{The Visualization Handbook}},
  PUBLISHER = {Academic Press},
  TITLE = {{AVS and AVS/Express}},
  YEAR = {2004},
  EDITOR = {Chuck Hansen and Chris Johnson},
  MONTH = DEC,
  PAGES = {655--672},
  FILE = {:D\:/Books/Publications/LibroHansen/hansen.pdf:PDF},
  KEYWORDS = {books},
  LANGID = {english},
  MVPUBTYPE = {books},
  URL = {http://www.elsevierdirect.com/product.jsp?isbn=9780123875822}
}
@INPROCEEDINGS{Favre2003,
  AUTHOR = {Jean Favre and Mario Valle},
  BOOKTITLE = {Fourth LACSI Symposium},
  TITLE = {{An In-House Development for Visualization in Molecular Science}},
  YEAR = {2003},
  ADDRESS = {Santa Fe, New Mexico},
  MONTH = OCT # { 27 -- 29},
  NOTE = {(poster)},
  CONFSITE = {http://lacsi.rice.edu/symposium/agenda_2003/},
  FILE = {:D\:\\Books\\Publications\\posters\\STM3-LACSI-poster\\STM3.jpg:JPG image},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@ARTICLE{Lyakhov2008,
  AUTHOR = {Lyakhov, A. O. and Oganov, A. and Valle, M.},
  JOURNAL = {Acta Crystallographica Section A},
  TITLE = {{Increasing the effectiveness of evolutionary crystal structure prediction using fingerprint function}},
  YEAR = {2008},
  MONTH = AUG,
  NUMBER = {a1},
  PAGES = {C206},
  VOLUME = {64},
  DOI = {10.1107/S0108767308093380},
  FILE = {:D\:\\Books\\Publications\\a38860.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@INCOLLECTION{Lyakhov2010a,
  AUTHOR = {Andriy O. Lyakhov and Artem R. Oganov and Mario Valle},
  BOOKTITLE = {{Modern Methods of Crystal Structure Prediction}},
  PUBLISHER = {Wiley-VCH},
  TITLE = {{Crystal Structure Prediction Using Evolutionary Approach}},
  YEAR = {2010},
  EDITOR = {Artem R. Oganov},
  MONTH = NOV,
  KEYWORDS = {books},
  LANGID = {english},
  MVPUBTYPE = {books},
  URL = {http://www.wiley-vch.de/publish/en/books/bySubjectPH00/ISBN3-527-40939-4/short/?sID=ou0r6rp7eaadonst3lfkjtktd1}
}
@ARTICLE{Lyakhov2010,
  AUTHOR = {Andriy O. Lyakhov and Artem R. Oganov and Mario Valle},
  JOURNAL = {Computer Physics Communications},
  TITLE = {How to predict very large and complex crystal structures},
  YEAR = {2010},
  ISSN = {0010-4655},
  MONTH = SEP,
  NUMBER = {9},
  PAGES = {1623--1632},
  VOLUME = {181},
  DOI = {10.1016/j.cpc.2010.06.007},
  FILE = {:D\:\\Books\\Publications\\USPEX-LargeComplexSystems-2010.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://www.sciencedirect.com/science/article/B6TJ5-5093N74-7/2/4796d929fdc0016b5830eb5b45ff0cc7}
}
@ARTICLE{Ma2009,
  AUTHOR = {Ma, Yanming and Eremets, Mikhail and Oganov, Artem R. and Xie, Yu and Trojan, Ivan and Medvedev, Sergey and Lyakhov, Andriy O. and Valle, Mario and Prakapenka, Vitali},
  JOURNAL = {Nature},
  TITLE = {Transparent dense sodium},
  YEAR = {2009},
  ISSN = {0028-0836},
  MONTH = MAR # { 14},
  NUMBER = {7235},
  PAGES = {182--185},
  VOLUME = {458},
  DOI = {10.1038/nature07786},
  FILE = {:D\:\\Books\\Publications\\nature07786_oganov.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  PUBLISHER = {Macmillan Publishers Limited}
}
@INPROCEEDINGS{Marmo2005,
  AUTHOR = {Roberto Marmo and Mario Valle},
  BOOKTITLE = {HUMAN AND MACHINE PERCEPTION: Communication, Interaction and Integration},
  TITLE = {Visual attention mechanisms for information visualization},
  YEAR = {2005},
  ADDRESS = {Cagliari, Italy},
  EDITOR = {Virginio Cantoni and others},
  MONTH = SEP,
  PAGES = {111--118},
  PUBLISHER = {World Scientific Publishing},
  SERIES = {Proceedings of HMP 2004},
  CONFSITE = {http://pacs.unica.it/hmp04/index.html},
  FILE = {:D\:\\Books\\Publications\\111-118MARMOetAll-F.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences},
  URL = {http://www.worldscibooks.com/compsci/5321.html}
}
@ARTICLE{Marmo2005a,
  AUTHOR = {Roberto Marmo and Mario Valle},
  JOURNAL = {Mondo Digitale (AICA)},
  TITLE = {Visualizzazione scientifica: un aiuto per capire},
  YEAR = {2005},
  MONTH = DEC,
  NUMBER = {4},
  PAGES = {45--58},
  VOLUME = {anno IV},
  FILE = {:D\:\\Books\\Publications\\Marmo_p._45-58.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general},
  URL = {http://www.mondodigitale.net/Rivista/06_numero_1/Marmo_p._45-58.pdf}
}
@BOOK{Marmo2004,
  AUTHOR = {Roberto Marmo and Mario Valle and Cinzia Zannoni},
  PUBLISHER = {{Editrice Il Rostro}},
  TITLE = {Introduzione alla visualizzazione scientifica},
  YEAR = {2004},
  KEYWORDS = {books},
  LANGID = {italian},
  MVPUBTYPE = {books},
  URL = {http://mariovalle.name/libro/index.html}
}
@ARTICLE{Moretti2014,
  AUTHOR = {Moretti, Sébastien and Laurenczy, Balazs and Gharib, Walid H. and Castella, Briséïs and Kuzniar, Arnold and Schabauer, Hannes and Studer, Romain A. and Valle, Mario and Salamin, Nicolas and Stockinger, Heinz and Robinson-Rechavi, Marc},
  JOURNAL = {Nucleic Acids Research},
  TITLE = {Selectome update: quality control and computational improvements to a database of positive selection},
  YEAR = {2014},
  NUMBER = {D1},
  PAGES = {D917--D921},
  VOLUME = {42},
  ABSTRACT = {Selectome (http://selectome.unil.ch/) is a database of positive selection, based on a branch-site likelihood test. This model estimates the number of nonsynonymous substitutions (dN) and synonymous substitutions (dS) to evaluate the variation in selective pressure (dN/dS ratio) over branches and over sites. Since the original release of Selectome, we have benchmarked and implemented a thorough quality control procedure on multiple sequence alignments, aiming to provide minimum false-positive results. We have also improved the computational efficiency of the branch-site test implementation, allowing larger data sets and more frequent updates. Release 6 of Selectome includes all gene trees from Ensembl for Primates and Glires, as well as a large set of vertebrate gene trees. A total of 6810 gene trees have some evidence of positive selection. Finally, the web interface has been improved to be more responsive and to facilitate searches and browsing.},
  DOI = {10.1093/nar/gkt1065},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://nar.oxfordjournals.org/content/42/D1/D917.abstract}
}
@ARTICLE{Oganov2011,
  AUTHOR = {Artem R. Oganov and Andriy O. Lyakhov and Mario Valle},
  JOURNAL = {Accounts of Chemical Research},
  TITLE = {{How Evolutionary Crystal Structure Prediction Works --- and Why}},
  YEAR = {2011},
  NUMBER = {3},
  PAGES = {227--237},
  VOLUME = {44},
  DOI = {10.1021/ar1001318},
  FILE = {:D\:\\Books\\Publications\\ar1001318.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://pubs.acs.org/doi/pdf/10.1021/ar1001318}
}
@ARTICLE{Oganov2007,
  AUTHOR = {Artem R. Oganov and Yanming Ma and Colin W. Glass and Mario Valle},
  JOURNAL = {Psi-k Newsletter},
  TITLE = {Evolutionary crystal structure prediction: overview of the {USPEX} method and some of its applications},
  YEAR = {2007},
  MONTH = DEC,
  PAGES = {1--10},
  VOLUME = {84},
  FILE = {:D\:\\Books\\Publications\\Highlight_84.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {english},
  MVPUBTYPE = {general},
  URL = {http://www.psi-k.org/newsletters/News_84/Highlight_84.pdf}
}
@INCOLLECTION{Oganov2010a,
  AUTHOR = {Artem R. Oganov and Yanming Ma and Andriy Lyakhov and Mario Valle and Carlo Gatti},
  BOOKTITLE = {High-Pressure Crystallography: From Fundamental Phenomena to Technological Applications},
  PUBLISHER = {Springer},
  TITLE = {Evolutionary crystal structure prediction and novel high-pressure phases},
  YEAR = {2010},
  EDITOR = {Elena Boldyreva and Przemyslaw Dera},
  MONTH = SEP,
  PAGES = {293--325},
  KEYWORDS = {books},
  LANGID = {english},
  MVPUBTYPE = {books}
}
@ARTICLE{Oganov2010,
  AUTHOR = {Oganov, Artem R. and Ma, Yanming and Lyakhov, Andriy O. and Valle, Mario and Gatti, Carlo},
  JOURNAL = {Reviews in Mineralogy and Geochemistry},
  TITLE = {{Evolutionary Crystal Structure Prediction as a Method for the Discovery of Minerals and Materials}},
  YEAR = {2010},
  NUMBER = {1},
  PAGES = {271--298},
  VOLUME = {71},
  DOI = {10.2138/rmg.2010.71.13},
  FILE = {:D\:\\Books\\Publications\\RevMineralGeochem-2010.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://rimg.geoscienceworld.org/cgi/content/abstract/71/1/271}
}
@ARTICLE{Oganov2009,
  AUTHOR = {Artem R. Oganov and Mario Valle},
  JOURNAL = {The Journal of Chemical Physics},
  TITLE = {How to quantify energy landscapes of solids},
  YEAR = {2009},
  MONTH = MAR # { 14},
  NUMBER = {10},
  PAGES = {104504},
  VOLUME = {130},
  DOI = {10.1063/1.3079326},
  FILE = {:D\:\\Books\\Publications\\Landscapes-JChemPhys-2009.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://link.aip.org/link/?JCP/130/104504/1}
}
@ARTICLE{Oganov2008,
  AUTHOR = {Artem R. Oganov and Mario Valle and Andriy Lyakhov and Yanming Ma and Yu Xie},
  JOURNAL = {Acta Crystallographica Section A},
  TITLE = {{Evolutionary crystal structure prediction and its applications to materials at extreme conditions}},
  YEAR = {2008},
  MONTH = AUG,
  NUMBER = {a1},
  PAGES = {C41--C42},
  VOLUME = {64},
  DOI = {10.1107/S0108767308098681},
  FILE = {:D\:\\Books\\Publications\\a38330.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@INPROCEEDINGS{Perrig2004,
  AUTHOR = {Alexandre Perrig and Mario Valle and Mohamed Farhat and Etienne Parkinson and Jean Favre and Fran\c{c}ois Avellan},
  BOOKTITLE = {Proceedings of the 22nd IAHR Symposium on Hydraulic Machinery and Systems},
  TITLE = {{N}umerical {F}low {A}nalysis in a {P}elton {T}urbine {B}ucket},
  YEAR = {2004},
  ADDRESS = {Stockholm, Sweden},
  MONTH = JUN # { 29 -- } # JUL # { 2},
  CONFSITE = {http://www.swedpower.se/IAHR2004/authors_papers.htm},
  FILE = {:D\:\\Books\\Publications\\paper_IAHR2004_perrig.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@INPROCEEDINGS{Perrig2006,
  AUTHOR = {Alexandre Perrig and Mario Valle and Mohamed Farhat and Etienne Parkinson and Jean Favre and François Avellan},
  BOOKTITLE = {Proceedings of the 23rd IAHR Symposium on Hydraulic Machinery and Systems},
  TITLE = {Onboard flow visualization in a {P}elton turbine bucket},
  YEAR = {2006},
  ADDRESS = {Yokohama, Japan},
  MONTH = OCT # { 17--21},
  CONFSITE = {http://stork.mach.me.ynu.ac.jp/},
  FILE = {:D\:\\Books\\Publications\\iahr.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@INPROCEEDINGS{Rigano2015,
  AUTHOR = {Alessandro Rigano and Vanni Galli and Raffaello Giulietti and Tiziano Leidi and Mario Valle and Ivo F. Sbalzarini and Caterina Strambio {De} Castillia},
  BOOKTITLE = {10th Annual OME Users Meeting},
  TITLE = {{OMEGA: an open source environment to facilitate the execution of motion analysis workflows, to estimate error and to share results}},
  YEAR = {2015},
  ADDRESS = {Paris},
  MONTH = JUN # { 2 -- 3},
  NOTE = {(poster)},
  CONFSITE = {https://www.openmicroscopy.org/site/community/minutes/meetings/10th-annual-users-meeting-june-2015},
  FILE = {:D\:\\Books\\Publications\\posters\\OME\\Rigano_et_al_OME_poster.pdf:PDF},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@INPROCEEDINGS{Schabauer2013,
  AUTHOR = {Hannes Schabauer and Mario Valle and Christoph Pacher and Heinz Stockinger and Alexandros Stamatakis and Marc Robinson-Rechavi and Nicolas Salamin},
  BOOKTITLE = {{SIB days 2013}},
  TITLE = {{FastCodeML: Optimizing and Parallelizing CodeML for the Branch-Site Model}},
  YEAR = {2013},
  ADDRESS = {Bienne, CH},
  MONTH = JAN # { 28--29},
  NOTE = {(poster)},
  CONFSITE = {http://www.newton.ac.uk/programmes/PLG/plgw05.html},
  CREATIONDATE = {2013-01-31T00:00:00},
  FILE = {:D\:\\Books\\Publications\\poster-sib-days-2013.pdf:PDF},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster},
  OWNER = {mvalle}
}
@INPROCEEDINGS{Schabauer2012,
  AUTHOR = {Hannes Schabauer and Mario Valle and Christoph Pacher and Heinz Stockinger and Alexandros Stamatakis and Marc Robinson-Rechavi and Ziheng Yang and Nicolas Salamin},
  BOOKTITLE = {IEEE International Workshop on High Performance Computational Biology (HiCOMB'12)},
  TITLE = {{SlimCodeML: An Optimized Version of CodeML for the Branch-Site Model}},
  YEAR = {2012},
  ADDRESS = {Shanghai, P.R. China},
  MONTH = MAY # { 21},
  CONFSITE = {http://www.hicomb.org},
  FILE = {:D\:\\Books\\Publications\\PID2209451.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@INPROCEEDINGS{Schabauer2011,
  AUTHOR = {Hannes Schabauer and Mario Valle and Heinz Stockinger and Nicolas Salamin and Marc Robinson-Rechavi},
  BOOKTITLE = {{Phylogenetics: New data, new Phylogenetic challenges}},
  TITLE = {{Toward a Supercomputing Approach to Large Scale Darwinian Evolution}},
  YEAR = {2011},
  ADDRESS = {Cambridge, UK},
  MONTH = JUN # { 20--24},
  NOTE = {(poster)},
  CONFSITE = {http://www.newton.ac.uk/programmes/PLG/plgw05.html},
  FILE = {:D\:\\Books\\Publications\\Poster_PLGW05_2011.pdf:PDF},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@INCOLLECTION{Valle2015,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {Kosmische Erzählungen in der Montessori-Pädagogik},
  PUBLISHER = {LIT Verlag},
  TITLE = {{Ansichten eines Wissenschaftlers zu Maria Montessoris Erzählung von Gott, der keine Hände hat}},
  YEAR = {2015},
  EDITION = {Third},
  EDITOR = {Ela Eckert and Malve Fehrer},
  ISBN = {978-3-643-13207-9},
  MONTH = NOV,
  PAGES = {57--70},
  KEYWORDS = {general},
  LANGID = {ngerman},
  MVPUBTYPE = {general},
  URL = {http://www.lit-verlag.de/isbn/3-643-13207-9}
}
@CONFERENCE{Valle2001,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {Virtuality 2001},
  TITLE = {Un sistema di visualizzazione immersiva ad alte prestazioni},
  YEAR = {2001},
  ADDRESS = {Torino, Italy},
  MONTH = OCT # { 29--30},
  CONFSITE = {http://virtualityconference.it/2002/virtuality2001/Mario%20Valle.html},
  FILE = {:D\:\\Books\\Publications\\Virtuality2001.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@CONFERENCE{Valle2002,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {Virtuality 2002},
  TITLE = {{User-in-the-loop: Supporto al Computational Steering in ambiente di simulazione}},
  YEAR = {2002},
  ADDRESS = {Torino, Italy},
  MONTH = OCT # { 28--29},
  CONFSITE = {http://virtualityconference.it/2002/italiano/giolitti_primo.html},
  FILE = {:D\:\\Books\\Publications\\PaperAVS-2002.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2005a,
  AUTHOR = {Mario Valle},
  JOURNAL = {Zeitschrift für Kristallographie},
  TITLE = {{STM3}: a chemistry visualization platform},
  YEAR = {2005},
  NOTE = {(PDF from the publisher: Oldenbourg Wissenschaftsverlag, München)},
  NUMBER = {5--6},
  PAGES = {585--588},
  VOLUME = {220},
  FILE = {:D\:\\Books\\Publications\\zfk0505-06_585-588.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  PUBSITE = {http://www.oldenbourg.de/verlag/zkristallogr/},
  URL = {http://mariovalle.name/publications/zfk0505-06_585-588.pdf}
}
@INPROCEEDINGS{Valle2006,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {Proceeding of the third symposium on {Applied Perception in Graphics and Visualization}},
  TITLE = {Representations that promote cognition: the case of chemistry visualization tools},
  YEAR = {2006},
  ADDRESS = {Boston, USA},
  MONTH = JUL # { 28--30},
  NOTE = {(poster)},
  CONFSITE = {http://www.apgv.org/},
  FILE = {:D\:\\Books\\Publications\\posters\\APGV\\apgv-valle.ppt:PowerPoint},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@INPROCEEDINGS{Valle2006b,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {Proceeding of {SIGGRAPH 2006}},
  TITLE = {Representations that promote cognition: the case of chemistry visualization tools},
  YEAR = {2006},
  ADDRESS = {Boston, USA},
  MONTH = JUL # { 30 -- } # AUG # { 3},
  NOTE = {(poster)},
  CONFSITE = {http://www.siggraph.org/s2006/main.php?f=conference&p=posters&s=28},
  FILE = {:D\:\\Books\\Publications\\posters\\APGV\\apgv-valle.ppt:PowerPoint},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@INPROCEEDINGS{Valle2006a,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {{Proceeding of IEEE Visualization 2006}},
  TITLE = {Visualization support to chemistry research},
  YEAR = {2006},
  ADDRESS = {Baltimore, USA},
  MONTH = OCT # { 29 -- } # NOV # { 3},
  NOTE = {(poster - selected as one of the 5 Best Poster Candidates of IEEE Visualization 2006)},
  CONFSITE = {http://vis.computer.org/vis2006/},
  FILE = {:D\:\\Books\\Publications\\posters\\IEEE-Vis2006\\vis06-valle.ppt:PowerPoint},
  KEYWORDS = {poster},
  LANGID = {english},
  MVPUBTYPE = {poster}
}
@INPROCEEDINGS{Valle2007,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {EGEE'07 Conference},
  TITLE = {Chemistry visualization tools in an integrated discovery cycle},
  YEAR = {2007},
  ADDRESS = {Budapest, Hungary},
  MONTH = OCT,
  PAGES = {99},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences},
  URL = {http://indico.cern.ch/event/18714/session/6/contribution/222/author/0}
}
@ARTICLE{Valle2009,
  AUTHOR = {Mario Valle},
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {Supercalcolatori e superbambini},
  YEAR = {2009},
  PAGES = {9--15},
  VOLUME = {100},
  FILE = {:D\:\\Books\\Publications\\IlQuadernoMontessori100.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2009a,
  AUTHOR = {Mario Valle},
  JOURNAL = {archi - rivista svizzera di architettura, ingegneria e urbanistica},
  TITLE = {Vedere per capire},
  YEAR = {2009},
  MONTH = JUN,
  PAGES = {65--68},
  VOLUME = {3},
  FILE = {:D\:\\Books\\Publications\\ArchiIngegneria.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2012,
  AUTHOR = {Mario Valle},
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {More is different},
  YEAR = {2012},
  PAGES = {52--56},
  VOLUME = {113},
  FILE = {:D\:\\Books\\Publications\\Il Quaderno Montessori\\more-is-different\\more is different.pdf:PDF},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2013,
  AUTHOR = {Mario Valle},
  JOURNAL = {{International Journal of Quantum Chemistry}},
  TITLE = {{Visualization: A Cognition Amplifier}},
  YEAR = {2013},
  ISSN = {1097-461X},
  NUMBER = {17},
  PAGES = {2040--2052},
  VOLUME = {113},
  DOI = {10.1002/qua.24480},
  FILE = {:D\:\\Books\\Publications\\10.1002_qua.24480.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed}
}
@ARTICLE{Valle2013a,
  AUTHOR = {Mario Valle},
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {Una mappa concettuale},
  YEAR = {2013},
  PAGES = {50--51},
  VOLUME = {117},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2013b,
  AUTHOR = {Mario Valle},
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {La madre di tutte le obiezioni},
  YEAR = {2013},
  PAGES = {23--25},
  VOLUME = {118/119},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@INPROCEEDINGS{Valle2014a,
  AUTHOR = {Mario Valle},
  BOOKTITLE = {2nd Joint AIC-SILS Conference},
  TITLE = {Crystal fingerprints space a novel paradigm to study crystal structures sets},
  YEAR = {2014},
  ADDRESS = {Florence},
  MONTH = SEP # { 15--18},
  ORGANIZATION = {AIC-SILS},
  PAGES = {92},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences}
}
@ARTICLE{Valle2014b,
  AUTHOR = {Mario Valle},
  JOURNAL = {Das Kind},
  TITLE = {{Durch die Augen eines Wissenschaftlers – Ein ungewohnter Blick auf Montessori}},
  YEAR = {2014},
  PAGES = {43--59},
  VOLUME = {55},
  KEYWORDS = {general},
  LANGID = {ngerman},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2016,
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {{Le domande più frequenti su Montessori (I)}},
  YEAR = {2016},
  PAGES = {24--27},
  VOLUME = {128},
  EDITOR = {Mario Valle},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@ARTICLE{Valle2016a,
  JOURNAL = {Il Quaderno Montessori},
  TITLE = {{Le domande più frequenti su Montessori (II)}},
  YEAR = {2016},
  PAGES = {38--39},
  VOLUME = {130},
  EDITOR = {Mario Valle},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general}
}
@INPROCEEDINGS{Valle2005,
  AUTHOR = {Mario Valle and Jean Favre and Etienne Parkinson and Alexandre Perrig and Mohamed Farhat},
  BOOKTITLE = {Proceedings Simulation and Visualization 2005},
  TITLE = {{Scientific Data Management for Visualization Implementation Experience}},
  YEAR = {2005},
  ADDRESS = {Magdeburg, Germany},
  MONTH = MAR # { 3 -- 4},
  CONFSITE = {http://www.simvis.org/},
  FILE = {:D\:\\Books\\Publications\\SDB-paper.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences},
  URL = {http://mariovalle.name/sdm/SDBpaper.pdf}
}
@INPROCEEDINGS{Valle2008,
  AUTHOR = {Mario Valle and Artem R. Oganov},
  BOOKTITLE = {Visual Analytics Science and Technology, 2008. VAST '08. IEEE Symposium on},
  TITLE = {{Crystal Structures Classifier for an Evolutionary Algorithm Structure Predictor}},
  YEAR = {2008},
  MONTH = OCT # { 19 -- 24},
  NOTE = {(One of the paper images has been selected for the proceedings' cover)},
  PAGES = {11--18},
  CONFSITE = {http://vis.computer.org/VisWeek2008/index.html},
  DOI = {10.1109/VAST.2008.4677351},
  FILE = {:D\:\\Books\\Publications\\fingerprints.pdf:PDF},
  KEYWORDS = {conferences},
  LANGID = {english},
  MVPUBTYPE = {conferences},
  URL = {http://vis.computer.org/VisWeek2008/vast/sessions_papers.html}
}
@ARTICLE{Valle2010,
  AUTHOR = {Valle, Mario and Oganov, Artem R.},
  JOURNAL = {Acta Crystallographica Section A},
  TITLE = {{Crystal fingerprint space {--} a novel paradigm for studying crystal-structure sets}},
  YEAR = {2010},
  MONTH = SEP,
  NOTE = {(PDF from the publisher of Foundations of Crystallography Online)},
  NUMBER = {5},
  PAGES = {507--517},
  VOLUME = {66},
  DOI = {10.1107/S0108767310026395},
  FILE = {:D\:\\Books\\Publications\\xg5005.pdf:PDF},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  PUBSITE = {http://journals.iucr.org/a/issues/2010/05/00/issconts.html},
  URL = {http://mariovalle.name/publications/ActaCrystPaper.pdf}
}
@ARTICLE{Valle2014,
  AUTHOR = {Valle, Mario and Schabauer, Hannes and Pacher, Christoph and Stockinger, Heinz and Stamatakis, Alexandros and Robinson-Rechavi, Marc and Salamin, Nicolas},
  JOURNAL = {Bioinformatics},
  TITLE = {Optimisation strategies for fast detection of positive selection on phylogenetic trees},
  YEAR = {2014},
  NUMBER = {8},
  PAGES = {1129--1137},
  VOLUME = {30},
  DOI = {10.1093/bioinformatics/btt760},
  KEYWORDS = {refereed},
  LANGID = {english},
  MVPUBTYPE = {refereed},
  URL = {http://bioinformatics.oxfordjournals.org/content/30/8/1129}
}
@BOOK{Valle2017,
  AUTHOR = {Mario Valle},
  PUBLISHER = {il leone verde},
  TITLE = {{La pedagogia Montessori e le nuove tecnologie}},
  YEAR = {2017},
  ISBN = {978-88-6580-174-1},
  SERIES = {Appunti Montessori},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general},
  URL = {http://mariovalle.name/montessori/libro-nuove-tecnologie/index.html}
}
@ARTICLE{Rigano2018,
  AUTHOR = {Rigano, Alessandro and Galli, Vanni and Clark, Jasmine M. and Pereira, Lara E. and Grossi, Loris and Luban, Jeremy and Giulietti, Raffaello and Leidi, Tiziano and Hunter, Eric and Valle, Mario and Sbalzarini, Ivo F. and Strambio-De-Castillia, Caterina},
  JOURNAL = {bioRxiv},
  TITLE = {{OMEGA: a software tool for the management, analysis, and dissemination of intracellular trafficking data that incorporates motion type classification and quality control}},
  YEAR = {2018},
  ABSTRACT = {MOTIVATION: Particle tracking coupled with time-lapse microscopy is critical for understanding the dynamics of intracellular processes of clinical importance. Under the impulse of advances in microscopic spatiotemporal resolution and automated computational methods, this field is increasingly amenable to multi-dimensional high-throughput data collection schemas (Snijder et al, 2012). Typically, complex particle tracking datasets generated by individual laboratories are produced with incompatible methodologies and cannot be compared to each other. There is therefore an unmet need for data management systems that facilitate data standardization, meta-analysis and structured data dissemination. The integration of analysis, visualization and quality control capabilities into such systems would eliminate the need for manually transferring the data to diverse downstream analysis tools while at the same time lying the foundations for shared trajectory data, particle tracking, and motion analysis standards. RESULTS: Here, we present Open Microscopy Environment inteGrated Analysis (OMEGA), a cross-platform data management, analysis and visualization system, for particle tracking data with particular emphasis on results from viral and vesicular trafficking experiments. OMEGA provides easy to use graphical interfaces to implement integrated particle tracking and motion analysis workflows while keeping track of error propagation and data provenance. Specifically, OMEGA: 1) imports image data and metadata from data management tools such as Open Microscopy Environment Remote Objects (OMERO; Allan et al., 2012); 2) tracks intracellular particles moving across time series of image planes; 3) facilitates parameter optimization and trajectory results inspection and validation; 4) performs downstream trajectory analysis and motion type classification; 5) estimates the uncertainty associated with motion analysis; and, 6) stores and facilitates dissemination of analysis results and analysis definition metadata on the basis of our newly proposed Minimum Information About Particle Tracking Experiments (MIAPTE; (Rigano & Strambio-De-Castillia, 2016; 2017) guidelines in combination with the OME-XML data model (Goldberg et al, 2005).},
  DOI = {10.1101/251850},
  LANGID = {english},
  MVPUBTYPE = {general},
  PUBLISHER = {Cold Spring Harbor Laboratory},
  URL = {https://www.biorxiv.org/content/early/2018/02/23/251850}
}
@BOOK{Valle2019,
  AUTHOR = {Mario Valle},
  PUBLISHER = {LIT Verlag},
  TITLE = {{Montessori-Pädagogik und neue Technologien. Eine mögliche Integration?}},
  YEAR = {2019},
  ISBN = {978-3-643-14265-8},
  SERIES = {Impulse der Reformpädagogik},
  KEYWORDS = {general},
  LANGID = {ngerman},
  MVPUBTYPE = {general},
  URL = {http://www.lit-verlag.de/isbn/3-643-14265-8}
}
@ARTICLE{Valle2020,
  AUTHOR = {Mario Valle},
  JOURNAL = {Senza Zaino},
  TITLE = {Montessori attraverso gli occhi di uno scienziato},
  YEAR = {2020},
  MONTH = APR,
  NUMBER = {2},
  PAGES = {37--40},
  VOLUME = {1},
  MVPUBTYPE = {general}
}
@BOOK{Valle2021,
  AUTHOR = {Mario Valle},
  PUBLISHER = {Il leone verde},
  TITLE = {Le tecnologie digitali in famiglia},
  YEAR = {2021},
  ISBN = {978-88-6580-278-6},
  SERIES = {Appunti Montessori},
  KEYWORDS = {general},
  LANGID = {italian},
  MVPUBTYPE = {general},
  URL = {http://mariovalle.name/montessori/libro-tecnologia-e-famiglia/index.html}
}
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