Useful Links

Open Microscopy Environment

Partners

Image analysis

Tracking algorithms and software tools

  • u-track is a tracking MatLab software tool produced by the Danuser's laboratory at Harvard University
  • ParticleTracker is an algorithm for single particle tracking produced by the Sbalzarini's laboratory at ETH-Zurich
  • Trajectory Segmentation is a MatLab toolbox produced by the Sbalzarini's laboratory at ETH-Zurich
  • Saxton's laboratory: useful information on the theory behind single particle tracking

Bioimage informatics

  • DMBI: Data Management for Bio-Imaging, a JISC funded project aimed at developing a "better understanding and planning of data management for bio-imaging within the John Innes Centre in the United Kingdom.

Workflow

Community

Sharing laboratory resources and protocols

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